MCB100147, Genome Informatics for Animals and Plants

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dc.contributor.authorGilbert, Don
dc.date.accessioned2019-01-10T14:35:53Z
dc.date.available2019-01-10T14:35:53Z
dc.date.issued2017-07
dc.description.abstractRenewal of this XSEDE Genome Informatics for Animals and Plants project will facilitate the accurate discovery and reconstruction of animal and plant genes, in current and future genomics collaborations, including those by this author and those independently undertaken. Precision genomics is essential in medicine, environmental health, sustainable agriculture, and research in biological sciences. Yet the popular genome informatics methods lag behind the high levels of accuracy and completeness in gene construction that are attainable with today's accurate RNA-seq data. EvidentialGene is a genome informatics pipeline for gene construction that has a measurably high accuracy and completeness rate, for the range of animals and plants. This pipeline algorithm is simple and robust, compared to gene modeling pipelines, and often outperforms their gene reconstructions.
dc.identifier.doihttps://doi.org/10.5967/RAGG-Q491
dc.identifier.urihttps://hdl.handle.net/2022/22627
dc.language.isoen
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/
dc.subjectgene reconstruction
dc.subjectanimal and plant genes
dc.subjectgenomics for precision medicine
dc.subjectenvironmental health
dc.subjectsustainable agriculture
dc.subjectbig data
dc.subjectbioinformatics pipeline
dc.subjecthigh performance computing
dc.subjectRNA-seq data
dc.subjecttranscriptome assembly
dc.titleMCB100147, Genome Informatics for Animals and Plants
dc.typeTechnical Report

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