MOTHER Step-by-step supplementary files
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Date
2023-04-24
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Abstract
This contains supplementary files for the document "MOTHER Ovarian Follicle Annotation using QuPath".
Included files are:
1. A sample ovary histology image "DP28_25081_Section3_10X_ome_copy.tif" (292MB)
2. A folder /classifiers/ has a single file that includes the definitions of the MOTHER follicle types (classes.json)
2. A folder /scripts/ containing two needed files.
a. "Create_Pie.groovy" a groovy QuPath script to overlay pie slices on an image.
c. "MOTHER_setup.groovy" a groovy QuPath script to define the MOTHER follicle types.
Additional training material for ovarian segmentation as part of the MOTHER project are included:
"OvarianFollicleID_training.mp4" a video recording of the training class on ovarian biology
"Ovary_MOTHER_Training2021_complete.pdf" the slides for the video above
Description
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Ovarian histology, slide annotation
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