Genes of Theobroma cacao, chocolate tree reconstructed with EvidentialGene

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dc.contributor.authorGilbert, Don
dc.date.accessioned2019-01-10T21:29:53Z
dc.date.available2019-01-10T21:29:53Z
dc.date.issued2018-08
dc.descriptionThe evigene_cacao2013 archive package contains a complete, reconstructed gene set of Theobroma cacao, chocolate tree, produced with EvidentialGene methods. This file set includes gene sequences, annotations, analyses and summary documents.
dc.description.methodologyRNA-Seq data of Theobroma cacao, chocolate tree are assembled with several RNA assemblers, using multiple options. EvidentialGene pipeline is used to process the many resulting assemblies by coding sequences, translated proteins, and gene evidence, then classify/reduce to a biologically informative transcriptome of primary and alternate transcripts.
dc.identifier.doihttps://doi.org/10.5967/506q-nm82
dc.identifier.urihttps://hdl.handle.net/2022/22647
dc.language.isoen
dc.relation.ispartoforganism
dc.relation.isversionofhttp://eugenes.org/EvidentialGene/plants/cacao/
dc.relation.isversionofhttps://sourceforge.net/projects/evidentialgene/files/evigene_cacao2013/
dc.relation.isversionofhttps://datacore.iu.edu/concern/data_sets/tm70mw46w
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/
dc.subjectorganism Theobroma cacao, chocolate tree
dc.subjectgenome informatics
dc.subjecttranscriptome assembly
dc.titleGenes of Theobroma cacao, chocolate tree reconstructed with EvidentialGene
dc.typeDataset

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