Cyberinfrastructure Resources for Genomics Research

Hallock, Barbara; Ganote, Carrie; Pespeni, Melissa
Keywords: genomics, XSEDE, campus bridging, biodiversity, NCGAS, research computing
URI: https://hdl.handle.net/2022/18610
Date: 2014-10
Citation: Presented at Plant and Animal Genome Conference XXII January 11-15 2014 San Diego, CA
Rights: Items indicated with a © are under copyright and used here with permission. Such items may not be reused without permission from the holder of copyright except where license terms noted on a slide permit reuse. Except where otherwise noted, contents of this presentation are copyright 2014 by the Trustees of Indiana University. This document is released under the Creative Commons Attribution 3.0 Unported license (http://creativecommons.org/licenses/by/3.0/). This license includes the following terms: You are free to share – to copy, distribute and transmit the work and to remix – to adapt the work under the following conditions: attribution – you must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work). For any reuse or distribution, you must make clear to others the license terms of this work.
Rights URL: http://creativecommons.org/licenses/by/3.0/
Type: Presentation

Abstract:

New DNA sequencing technologies are generating more sequence data, faster, and cheaper. But there is a catch: the sequences are shorter and the nucleotide identification has higher error rates, meaning that the computational challenge of assembling a full genome from sequence data is also greater. In this poster, we examine cyberinfrastructure resources available to researchers undertaking genomics work, and present a case study that illustrates how one lab is currently making use of these resources.

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Items indicated with a © are under copyright and used here with permission. Such items may not be reused without permission from the holder of copyright except where license terms noted on a slide permit reuse. Except where otherwise noted, contents of this presentation are copyright 2014 by the Trustees of Indiana University. This document is released under the Creative Commons Attribution 3.0 Unported license (http://creativecommons.org/licenses/by/3.0/). This license includes the following terms: You are free to share – to copy, distribute and transmit the work and to remix – to adapt the work under the following conditions: attribution – you must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work). For any reuse or distribution, you must make clear to others the license terms of this work.

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