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dc.contributor.author Polly, P. David
dc.date.accessioned 2012-07-25T19:41:18Z
dc.date.available 2012-07-25T19:41:18Z
dc.date.issued 2012-07-24
dc.identifier.citation Polly, P. D. 2012. Phylogenetics for Mathematica. Version 2.1. Department of Geological Sciences, Indiana University: Bloomington, Indiana. en
dc.identifier.uri http://mypage.iu.edu/~pdpolly/Software.html en
dc.identifier.uri http://hdl.handle.net/2022/14614
dc.description.abstract This add-in package for Mathematica performs basic phylogenetic functions, including reading and drawing Newick format trees, calculating phylogenetically independent contrasts, reconstructing ancestral values for continuous traits, performing random walks, and simulating continuous traits on phylogenetic trees. The file is a ".m" file, which can be imported into Mathematica 6.0 and later (functions do not work in earlier versions of Mathematica). Install using the "Install" item on the "File" menu. Once installed, you must load the package like any other with the line "<<PollyPhylogenetics", using either this suggested name or another. en
dc.language.iso en en
dc.publisher P. David Polly en
dc.rights You are free: to Share — to copy, distribute and transmit the work to Remix — to adapt the work Under the following conditions: Attribution — You must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work). Noncommercial — You may not use this work for commercial purposes. Share Alike — If you alter, transform, or build upon this work, you may distribute the resulting work only under the same or similar license to this one. With the understanding that: Waiver — Any of the above conditions can be waived if you get permission from the copyright holder. Public Domain — Where the work or any of its elements is in the public domain under applicable law, that status is in no way affected by the license. Other Rights — In no way are any of the following rights affected by the license: Your fair dealing or fair use rights, or other applicable copyright exceptions and limitations; The author's moral rights; Rights other persons may have either in the work itself or in how the work is used, such as publicity or privacy rights. en
dc.rights.uri http://creativecommons.org/licenses/by-nc-sa/3.0/ en
dc.subject Phylogenetics en
dc.subject Ancestral Node Reconstruction en
dc.subject Newick Trees en
dc.title Phylogenetics for Mathematica (Ver. 2.1) en
dc.type Software en


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You are free:
 to Share — to copy, distribute and transmit the work
 to Remix — to adapt the work
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 Noncommercial — You may not use this work for commercial purposes.
 Share Alike — If you alter, transform, or build upon this work, you may distribute the resulting work only under the same or similar license to this one.
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 Rights other persons may have either in the work itself or in how the work is used, such as publicity or privacy rights. You are free: to Share — to copy, distribute and transmit the work to Remix — to adapt the work Under the following conditions: Attribution — You must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work). Noncommercial — You may not use this work for commercial purposes. Share Alike — If you alter, transform, or build upon this work, you may distribute the resulting work only under the same or similar license to this one. With the understanding that: Waiver — Any of the above conditions can be waived if you get permission from the copyright holder. Public Domain — Where the work or any of its elements is in the public domain under applicable law, that status is in no way affected by the license. Other Rights — In no way are any of the following rights affected by the license: Your fair dealing or fair use rights, or other applicable copyright exceptions and limitations; The author's moral rights; Rights other persons may have either in the work itself or in how the work is used, such as publicity or privacy rights.

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