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  Title: Harvesting Field Station Data: Automating Raspberry Pi Sensors to Collaborative Websites, and Update  Author: Sanders, Sheri; Foran, Eliza; Guido, Emmanuel; Anderson, Jazzly; Slayton, Thomas; Doak, Thomas Date: 2019-09-09
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  Title: Genome and transcriptome analysis of fish tapeworm Nippotaenia percotti through scientific collaboration between research labs and national cyberinfrastructure.  Author: Papudeshi, Bhavya; Chafin, Tyler K; Sanders, Sheri A; Ganote, Carrie; Reshetnikov, Andrey N; Sokolov, Sergey G; Doak, Thomas; Pummill, Jeff F; Douglas, Marlis R.; Douglas, Michael E. Date: 2020-01-13
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  Title: National Center for Genome Analysis Support (NCGAS): Genomics and other Science in the NSF-Funded Jetstream Cloud  Author: Doak, Thomas; Sanders, Sheri; Ganote, Carrie; Papudeshi, Bhavya; Fischer, Jeremy; Hancock, David Y. Date: 2020-01-13
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  Title: Mining Microbial Genomes from Datasets on the Sequence Read Archive  Author: Papudeshi, Bhavya; Leffler, Haley; Ganapanei, Sruthi; Sanders, Sheri; Ganote, Carrie; Doak, Thomas Date: 2020-01-15
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  Title: Navigating the Sequence Read Archive to identify crAssphage, an ubiquitous inhabitant of the human microbiome  Author: Cai, Jasmine X.; Weathers, Jania G.; Leffler, Haley; Ganapaneni, Sruthi; Papudeshi, Bhavya; Sanders, Sheri; Doak, Thomas G. Date: 2019-07-14
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  Title: A workflow to identify genomes in the Sequence Read Archive for phylogenomic analysis  Author: Leffler, Haley; Ganapaneni, Sruthi; Papudeshi, Bhavya; Ganote, Carrie; Sanders, Sheri; Doak, Thomas G. Date: 2019-06-23
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  Title: Harvesting Field Station Data: Automating Data Flow from Raspberry Pi Sensors to Collaborative Websites  Author: Sanders, Sheri; Guido, Emmanuel; Anderson, Jazzly; Slayton, Thomas; Doak, Thomas G. Date: 2018-09-22
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  Title: Developing a workflow for bioacoustic recording devices and frog call analysis within Jetstream  Author: Foran, Eliza; Anderson, Jazzly; Slayton, Thomas; Guido, Emmanuel; Doak, Thomas; Sanders, Sheri Date: 2019-04-12
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  Title: Mining the Sequence Read Archive to identify crAssphage, a ubiquitous inhabitant of the human microbiome, in dog and pig samples  Author: Leffler, Haley; Ganapaneni, Sruthi; Papudeshi, Bhavya; Sanders, Sheri; Doak, Thomas Date: 2019-04-12
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  Title: Coupling metagenomics with high-performance computing to mine the Sequence Read Archive (SRA) to analyze Pseudomonas phage PAK-P1  Author: Ganapaneni, Sruthi; Leffler, Haley; Papudeshi, Bhavya; Sanders, Sheri; Doak, Thomas Date: 2019-04-12
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  Title: Population Genetics of Tree Swallows, in Collaboration with NCGAS  Author: Sanders, Sheri; Papudeshi, Bhavya; Ganote, Carrie; Doak, Tom; Mansfield, Charles; Tseng, Chi Yen; Custer, Thomas; Custer, Christine; Matson, Cole Date: 2019-01-14
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  Title: The Genome of Fish Tapeworm Nippotaenia percotti as a Potential Bookmark for Gene Loci that Facilitates Anthropogenic Infection.  Author: Sanders, Sheri; Papudeshi, Bhavya; Ganote, Carrie; Doak, Tom; Chafin, Tyler; Reshetnikov, Andrey; Sokolov, Sergey; Pummil, Jeff; Douglas, Marlis; Douglas, Michael Date: 2019-01-14
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  Title: Compute resources available to the research community for microbiome analysis  Author: Papudeshi, Bhavya; Sanders, Sheri; Ganote, Carrie; Doak, Tom Date: 2019-01-16
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  Title: NCGAS Makes Robust Transcriptome Assembly Even Easier with Added Features to an Accessible de novo Transcriptome Assembly Workflow  Author: Sanders, Sheri; Papudeshi, Bhavya; Ganote, Carrie; Doak, Tom Date: 2019-01-12
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  Title: Consequences of whole genome duplication in Paramecium sps.  Author: McGrath, C.L.; Gout, J.F.; Johri, P.; Doak, T.G.; Lynch, M. Date: 2013-07
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  Title: Whole-genome duplication, the Paramecium aurelia radiation, and the evolution of gene expression.  Author: Doak, T.G.; Gout, J.F.; Bright, L.; Johri, P.; Sung, W.; Lynch, M.; McGrath, C.L. Date: 2014-04-12
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  Title: Consequences of whole genome duplication in Paramecium sps.  Author: McGrath, C.L.; Gout, J.F.; Johri, P.; Doak, T.G.; Lynch, M. Date: 2014-01
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  Title: Consequences of whole genome duplication in Paramecium sps.  Author: McGrath, C.L.; Gout, J.F.; Johri, P.; Doak, T.G.; Lynch, M. Date: 2013-05
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  Title: RNA-Seq Demo on Galaxy  Author: Ganote, Carrie; Papudeshi, Bhavya; Sanders, Sheri; Doak, Tom Date: 2018-10-25
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  Title: Introduction to Metagenomics  Author: Papudeshi, Bhavya; Sanders, Sheri; Ganote, Carrie; Doak, Tom Date: 2018-10-23

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