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NCGAS
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Consortium for Top Down Proteomics (CTDP)
[17]
http://topdownproteomics.org/
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Recent Submissions
Title:
NCGAS 2021 Annual User Assessment Summary Report
Author:
Jankowski, Harmony
;
Wernert, Julie
;
Sanders, Sheri
Date:
2021-06-30
Title:
NCGAS 2020 Annual User Survey
Author:
Wernert, Julie
;
Sanders, Sheri
;
Papudeshi, Bhavya
;
Jankowski, Harmony
Date:
2020-10-26
Title:
NCGAS NSF Annual Report, September 1, 2019 – August 31, 2020
Author:
Sanders, Sheri
;
Doak, Thomas
;
Snapp-Childs, Winona
;
Hahn, Matthew
;
Ye, Yuzhen
;
Stewart, Craig
Date:
2020-09-09
Title:
Harvesting Field Station Data: Automating Raspberry Pi Sensors to Collaborative Websites, and Update
Author:
Sanders, Sheri
;
Foran, Eliza
;
Guido, Emmanuel
;
Anderson, Jazzly
;
Slayton, Thomas
;
Doak, Thomas
Date:
2019-09-09
Title:
Genome and transcriptome analysis of fish tapeworm Nippotaenia percotti through scientific collaboration between research labs and national cyberinfrastructure.
Author:
Papudeshi, Bhavya
;
Chafin, Tyler K
;
Sanders, Sheri A
;
Ganote, Carrie
;
Reshetnikov, Andrey N
;
Sokolov, Sergey G
;
Doak, Thomas
;
Pummill, Jeff F
;
Douglas, Marlis R.
;
Douglas, Michael E.
Date:
2020-01-13
Title:
National Center for Genome Analysis Support (NCGAS): Genomics and other Science in the NSF-Funded Jetstream Cloud
Author:
Doak, Thomas
;
Sanders, Sheri
;
Ganote, Carrie
;
Papudeshi, Bhavya
;
Fischer, Jeremy
;
Hancock, David Y.
Date:
2020-01-13
Title:
Mining Microbial Genomes from Datasets on the Sequence Read Archive
Author:
Papudeshi, Bhavya
;
Leffler, Haley
;
Ganapanei, Sruthi
;
Sanders, Sheri
;
Ganote, Carrie
;
Doak, Thomas
Date:
2020-01-15
Title:
ABI Sustaining: The National Center for Genome Analysis Support 2019 Annual Report
Author:
Doak, Thomas
;
Stewart, Craig
;
Henschel, Robert
;
Ye, Yuzhen
Date:
2019-09-10
Title:
Summary Report on Scaling the Introduction to R for Biologists Workshop by National Center for Genome Analysis Support (NCGAS) to a Massive Open Online Course (MOOC)
Author:
Sanders, Sheri
;
Doak, Thomas
;
Ganote, Carrie
;
Papudeshi, Bhavya
;
Stewart, Craig
Date:
2019-12-10
Title:
Summary of the National Center for Genome Analysis Support (NCGAS) 2018-2019 de Novo Transcriptome Workflow and Workshops
Author:
Sanders, Sheri
;
Doak, Thomas
;
Ganote, Carrie
;
Papudeshi, Bhavya
;
Stewart, Craig
Date:
2019-12-10
Title:
NCGAS Annual User Assessment 2019 Summary Report
Author:
Wernert, Julie A.
;
Jankowski, Harmony
Date:
2019-09
Title:
Navigating the Sequence Read Archive to identify crAssphage, an ubiquitous inhabitant of the human microbiome
Author:
Cai, Jasmine X.
;
Weathers, Jania G.
;
Leffler, Haley
;
Ganapaneni, Sruthi
;
Papudeshi, Bhavya
;
Sanders, Sheri
;
Doak, Thomas G.
Date:
2019-07-14
Title:
A workflow to identify genomes in the Sequence Read Archive for phylogenomic analysis
Author:
Leffler, Haley
;
Ganapaneni, Sruthi
;
Papudeshi, Bhavya
;
Ganote, Carrie
;
Sanders, Sheri
;
Doak, Thomas G.
Date:
2019-06-23
Title:
Harvesting Field Station Data: Automating Data Flow from Raspberry Pi Sensors to Collaborative Websites
Author:
Sanders, Sheri
;
Guido, Emmanuel
;
Anderson, Jazzly
;
Slayton, Thomas
;
Doak, Thomas G.
Date:
2018-09-22
Title:
Developing a workflow for bioacoustic recording devices and frog call analysis within Jetstream
Author:
Foran, Eliza
;
Anderson, Jazzly
;
Slayton, Thomas
;
Guido, Emmanuel
;
Doak, Thomas
;
Sanders, Sheri
Date:
2019-04-12
Title:
Mining the Sequence Read Archive to identify crAssphage, a ubiquitous inhabitant of the human microbiome, in dog and pig samples
Author:
Leffler, Haley
;
Ganapaneni, Sruthi
;
Papudeshi, Bhavya
;
Sanders, Sheri
;
Doak, Thomas
Date:
2019-04-12
Title:
Coupling metagenomics with high-performance computing to mine the Sequence Read Archive (SRA) to analyze Pseudomonas phage PAK-P1
Author:
Ganapaneni, Sruthi
;
Leffler, Haley
;
Papudeshi, Bhavya
;
Sanders, Sheri
;
Doak, Thomas
Date:
2019-04-12
Title:
Population Genetics of Tree Swallows, in Collaboration with NCGAS
Author:
Sanders, Sheri
;
Papudeshi, Bhavya
;
Ganote, Carrie
;
Doak, Tom
;
Mansfield, Charles
;
Tseng, Chi Yen
;
Custer, Thomas
;
Custer, Christine
;
Matson, Cole
Date:
2019-01-14
Title:
The Genome of Fish Tapeworm Nippotaenia percotti as a Potential Bookmark for Gene Loci that Facilitates Anthropogenic Infection.
Author:
Sanders, Sheri
;
Papudeshi, Bhavya
;
Ganote, Carrie
;
Doak, Tom
;
Chafin, Tyler
;
Reshetnikov, Andrey
;
Sokolov, Sergey
;
Pummil, Jeff
;
Douglas, Marlis
;
Douglas, Michael
Date:
2019-01-14
Title:
Compute resources available to the research community for microbiome analysis
Author:
Papudeshi, Bhavya
;
Sanders, Sheri
;
Ganote, Carrie
;
Doak, Tom
Date:
2019-01-16
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Author
Ganote, Carrie (60)
Sanders, Sheri (47)
Doak, Tom (27)
Doak, Thomas (26)
Papudeshi, Bhavya (26)
Wu, Le-Shin (19)
Barnett, William K. (14)
LeDuc, Richard D. (14)
Doak, Thomas G. (12)
Stewart, Craig A. (12)
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NCGAS (25)
Jetstream (8)
Galaxy (7)
Bioinformatics (6)
bioinformatics (5)
galaxy (4)
genomics (4)
Sequence Read Archive (4)
Cyberinfrastructure (3)
HPC training (3)
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