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Permanent link for this collectionhttps://hdl.handle.net/2022/20648
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Item Ubuntu 18 Publishing Test(not given, 2019-6-14) Trumbore, BenAn image created from the newly updated Jetstream Ubuntu 18.04 image.Item Ubuntu-Docker-Dev-Lake-Problem(not given, 2019-5-15) Vaillancourt, PeterA test image created from the Ubuntu 18.04 Devel and Docker v1.19 image with the Lake Problem code added (https://github.com/federatedcloud/Lake_Problem_DPS) Ubuntu 18.04 LTS Development + GUI support + Docker Based on Ubuntu cloud image for 18.04 LTS with basic dev tools, GUI/Xfce addedItem Test of Publishing a Jetstream VM(not given, 2019-2-28) Trumbore, BenThis CentOS image includes Python 3 and is meant as a test of the process for publishing a Jetstream VM.Item WQ-MAKER: Scaling genome annotation with MAKER using distributed computing and cloud resources on Jetstream cloud(not given, 2019-1-23) Merchant, Nirav; Devisetty, Upendra; Hazekamp, NicholasGenome annotation using MAKER using cctools (WQ-MAKER) Based on work by Cooperative Computing Lab http://ccl.cse.nd.edu/. and Yandell Lab http://www.yandell-lab.org/software/maker.htmlItem Ubuntu 14.04.3 Deployable VM Image for Phylogenetics and RADseq(not given, 2017-2-27) Chafin, Tyler KJetstream image based on Ubuntu 14.04.3 including multiple common software packages for processing and phylogenetic analysis of RADseq data. v2.0 as of February 27, 2017: Added numerous packages, as well as environmental modules (e.g. "module avail") for package management. Added software: ABYSS, Anadonda (Python 2.7), Anaconda (Python 3.6), BBmap, BEAST, BEDtools, Bowtie2, BWA, CD-HIT, EXaML, fineRADstructure, HyDE, IpyRAD, LINKS, Migrate-N, MrBayes, MUSCLE, NCBI-BLAST+, OPERA-LG, PartitionFinder2, PEAR, pyRAD, RAxML, R (3.3.2 + common genetics packages), R (3.1.1), SAMtools, SOAPdenovo2, Structure, Trimmomatic, Vsearch.Item PEARC17 R Tutorial(not given, 2017-7-6) Fischer, Jeremy; Gniady, TassieImage created to accompany the PEARC17 R Tutorial in New Orleans, LA - July 10, 2017Item geo-c7d-bm-160810-001 - Geo's CentOS 7 Benchmarking VM(not given, 2016-8-10) Turner, George WImage used to benchmark the Jetstream cluster virtual machinesItem Wrangler iRODS -- CentOS 6.7(not given, 2016-12-2) Hanna, Chris; Fischer, JeremyImage with pre-installed iRODS 4.1 and 'isetup' script for easy generation of iRODS client environment for Wrangler at IU or TACC. -- Preserving for posterity - this image has been retired --Item Ubuntu 16.04 LTS Cloud Image (Test)(2016-05-03) Fischer, Jeremy; Stewart, Craig A.Item Decoding brain connectomes by encoding anatomical structure in multidimensional tensor-space(2016-04-26) Pestilli, Franco; Caiafa, CesarA collection of raw diffusion-weighted magnetic resonance imaging data, fiber tractography solutions, and associated derivatives.Item CentOS 6 (6.7) Development GUI(2016-03-31) Fischer, Jeremy; Stewart, CraigItem CentOS 7 (7.2) Development(2016-03-31) Fischer, Jeremy; Stewart, CraigItem CentOS 6 (6.7) Development(2016-03-31) Fischer, Jeremy; Stewart, CraigItem Ubuntu 14.04.3 Trusty Tahr(2016-03-31) Fischer, Jeremy; Stewart, CraigItem Ubuntu 14.04.3 Development GUI(2016-03-31) Fischer, Jeremy; Stewart, CraigItem CentOS 7 Generic Cloud Raw VM Image(UITS Research Technologies - CESG, 2016-02-25) Fischer, Jeremy L., Stewart, Craig A.Item Ubuntu 14.04 Trusty Tahr TLS Sample Image(UITS Research Technologies - CESG, 2016-02-23) Fischer, Jeremy; Stewart, Craig