README FILE FOR Genes of Pogonus chalceus reconstructed with EvidentialGene

Created by:
Donald G. Gilbert
1001 E. 3rd St.
Bloomington, IN, 47405
gilbertd@indiana.edu or gilbert.bionet@gmail.com

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LOCATION
http://hdl.handle.net/2022/22628

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DOI
https://doi.org/10.5967/p53x-gw95

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FOLDERS AND FILES LIST

README.txt	2013-Jun
rnasource_pogonus_sra.csv	2013-Jan
publicset/	
  publicset/pogonus1all3.aa_pub.fa.gz	2013-Jun, 37M
  publicset/pogonus1all3.ann.txt.gz	2013-Jun, 6.5M
  publicset/pogonus1all3.cds_pub.fa.gz	2013-Jun, 69M
  publicset/pogonus1all3.mainalt.tab	2013-Jun, 4.1M
  publicset/pogonus1all3.mrna_pub.fa.gz	2013-Jun, 83M
  publicset/pogonus1all3.pubids.gz	2013-Jun, 1.6M
  publicset/pogonus1all3.trimvec_done	2013-Jun

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FILE INFORMATION

This evigene_beetle_pogocha2013 folder contains a complete, reconstructed gene set of 
Pogonus chalceus, produced with EvidentialGene methods.  This file set includes gene
sequences, annotations, analyses and summary documents.

rnasource_pogonus_sra.csv	: SRA RNA-Seq data table
publicset/	: publication genes sequences and annotations
  publicset/pogonus1all3.aa_pub.fa.gz	: protein sequences
  publicset/pogonus1all3.ann.txt.gz	: genes annotations table
  publicset/pogonus1all3.cds_pub.fa.gz	: coding sequences
  publicset/pogonus1all3.mainalt.tab	: locus main/alternate ID table
  publicset/pogonus1all3.mrna_pub.fa.gz	: mRNA sequences
  publicset/pogonus1all3.pubids.gz	: public IDs, object IDs, classification of genes


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BIBLIOGRAPHICAL INFORMATION

RESEARCH QUESTION(S)
If you have questions please contact gilbert.bionet@gmail.com 

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CHANGELOG

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COPYRIGHT & LICENSING INFORMATION

This data is licensed for reuse under a Creative Commons Attribution 3.0 license